A Clockwork Orange? (A brief musing on the concept of a neural “code”)

I was asked this question on Quora:

Are there many layers of neural codes from the human retina to the optic nerve and the optic nerve to the brain, or are they essentially same signals relayed?

Here’s how I responded:

Here’s a question: in a system composed of clockwork, is there a “code”?

I ask this because I find that the “code” metaphor is often misleading when thinking about biology. Codes are composed of symbols. But it is not clear that neurons communicate using symbols.

“Are thoughts just a bunch of electrical and chemical signals being tossed around inside the brain, or is there more to it than that?”

“In our world,” said Eustace, “a star is a huge ball of flaming gas.”

“Even in your world, my son, that is not what a star is but only what it is made of…”

The Voyage of the Dawn Treader, CS Lewis

I really like the quote above, which is from the Chronicles of Narnia. It raises a neat little metaphysical question:

Why do we assume that what a thing is made up of is what a thing is?

Dopamine is not the “feel good” molecule (and the very concept of a feel good molecule is meaningless)

220px-dopamine_3d_ball

Dopamine is not the feel good molecule or the basis of pleasure. The idea that any molecule considered in isolation could be the basis of a subjective experience is basically nonsense.

For people who can’t really reason through this idea, there is plenty of experimental evidence showing the complexity of each and every “celebrity” neurochemical — dopamine, serotonin, oxytocin, and so on.

Is a memory a bunch of atoms? And does this mean we can transfer exact memories?

I was asked the following question on Quora.

Are specific memories just arrangements of atoms in our brains? Could you put certain molecules in someones head and give them an exact memory that you had?

Short answer: No.


Modern science has shown that every thing is an arrangement of atoms: neurons, apples, tables, rockets, asteroids, aardvarks… they are all made up of atoms.

The question now is this: is a memory a thing?